Coding

Part:BBa_M12001

Designed by: Ryan Alexander   Group: MIT BE 20.20 - S09 MIT BE 20.20 - S10   (2009-05-12)


CDH1

gene encodes for E-cadherin, a calcium dependent cell-cell adhesion glycoprotein comprised of five extracellular cadherin repeats, a transmembrane region and a highly conserved cytoplasmic tail.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 2235
    Illegal NheI site found at 6782
    Illegal NheI site found at 6919
    Illegal NheI site found at 7679
    Illegal NheI site found at 11981
    Illegal NheI site found at 16632
    Illegal NheI site found at 24903
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 2045
    Illegal BglII site found at 4017
    Illegal BglII site found at 7380
    Illegal BglII site found at 8857
    Illegal BglII site found at 9480
    Illegal BglII site found at 15042
    Illegal BglII site found at 15938
    Illegal BamHI site found at 268
    Illegal BamHI site found at 2123
    Illegal BamHI site found at 6055
    Illegal BamHI site found at 12352
    Illegal BamHI site found at 25584
    Illegal BamHI site found at 29124
    Illegal BamHI site found at 35442
    Illegal XhoI site found at 24043
    Illegal XhoI site found at 41228
    Illegal XhoI site found at 46829
    Illegal XhoI site found at 55567
    Illegal XhoI site found at 57637
    Illegal XhoI site found at 59211
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 229
    Illegal NgoMIV site found at 399
    Illegal NgoMIV site found at 6493
    Illegal NgoMIV site found at 13177
    Illegal NgoMIV site found at 45655
    Illegal NgoMIV site found at 49607
    Illegal AgeI site found at 1455
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 919
    Illegal BsaI site found at 6767
    Illegal BsaI site found at 6945
    Illegal BsaI site found at 9290
    Illegal BsaI site found at 10003
    Illegal BsaI site found at 12834
    Illegal BsaI site found at 13863
    Illegal BsaI.rc site found at 610
    Illegal BsaI.rc site found at 3107
    Illegal BsaI.rc site found at 14043
    Illegal BsaI.rc site found at 19119
    Illegal BsaI.rc site found at 19934
    Illegal BsaI.rc site found at 22849
    Illegal BsaI.rc site found at 27361
    Illegal SapI site found at 4067
    Illegal SapI site found at 33434
    Illegal SapI site found at 33537
    Illegal SapI site found at 34509
    Illegal SapI site found at 37322
    Illegal SapI site found at 38071
    Illegal SapI site found at 38349
    Illegal SapI.rc site found at 27702
    Illegal SapI.rc site found at 29041
    Illegal SapI.rc site found at 31111
    Illegal SapI.rc site found at 32526
    Illegal SapI.rc site found at 40756
    Illegal SapI.rc site found at 42020
    Illegal SapI.rc site found at 49210


[edit]
Categories
Parameters
None